Gene : evm_27.TU.AmTr_v1.0_scaffold00001.159 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  157
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.159 Secondary Identifier:  ? PAC:31551436
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.159 0.5kb upstream 0.5kb upstream 4193 true AmTr_v1.0_scaffold00001: 2762968-2767160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 2762968-2763467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 0.5kb downstream 0.5kb downstream 4193 true AmTr_v1.0_scaffold00001: 2763468-2767660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 2767161-2767660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 1.0kb upstream 1.0kb upstream 4693 true AmTr_v1.0_scaffold00001: 2762468-2767160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 2762468-2763467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 1.0kb downstream 1.0kb downstream 4693 true AmTr_v1.0_scaffold00001: 2763468-2768160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 2767161-2768160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 2.0kb upstream 2.0kb upstream 5693 true AmTr_v1.0_scaffold00001: 2761468-2767160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 2761468-2763467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 2.0kb downstream 2.0kb downstream 5693 true AmTr_v1.0_scaffold00001: 2763468-2769160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 2767161-2769160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 5.0kb upstream 5.0kb upstream 8693 true AmTr_v1.0_scaffold00001: 2758468-2767160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 2758468-2763467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 5.0kb downstream 5.0kb downstream 8693 true AmTr_v1.0_scaffold00001: 2763468-2772160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 2767161-2772160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 10.0kb upstream 10.0kb upstream 13693 true AmTr_v1.0_scaffold00001: 2753468-2767160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 2753468-2763467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 10.0kb downstream 10.0kb downstream 13693 true AmTr_v1.0_scaffold00001: 2763468-2777160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.159 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 2767161-2777160 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain