Gene : evm_27.TU.AmTr_v1.0_scaffold00001.164 A. trichopoda v1.0
Defline:  (1 of 464) PF01535 - PPR repeat (PPR) Genomic Order:  162
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.164 Secondary Identifier:  ? PAC:31551265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.164 0.5kb upstream 0.5kb upstream 2476 true AmTr_v1.0_scaffold00001: 2837001-2839476 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 2838977-2839476 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 0.5kb downstream 0.5kb downstream 2476 true AmTr_v1.0_scaffold00001: 2836501-2838976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 2836501-2837000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 1.0kb upstream 1.0kb upstream 2976 true AmTr_v1.0_scaffold00001: 2837001-2839976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 2838977-2839976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 1.0kb downstream 1.0kb downstream 2976 true AmTr_v1.0_scaffold00001: 2836001-2838976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 2836001-2837000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 2.0kb upstream 2.0kb upstream 3976 true AmTr_v1.0_scaffold00001: 2837001-2840976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 2838977-2840976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 2.0kb downstream 2.0kb downstream 3976 true AmTr_v1.0_scaffold00001: 2835001-2838976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 2835001-2837000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 5.0kb upstream 5.0kb upstream 6976 true AmTr_v1.0_scaffold00001: 2837001-2843976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 2838977-2843976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 5.0kb downstream 5.0kb downstream 6976 true AmTr_v1.0_scaffold00001: 2832001-2838976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 2832001-2837000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 10.0kb upstream 10.0kb upstream 11976 true AmTr_v1.0_scaffold00001: 2837001-2848976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 2838977-2848976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 10.0kb downstream 10.0kb downstream 11976 true AmTr_v1.0_scaffold00001: 2827001-2838976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.164 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 2827001-2837000 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain