Gene : evm_27.TU.AmTr_v1.0_scaffold00002.29 A. trichopoda v1.0
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  29
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.29 Secondary Identifier:  ? PAC:31562246
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYCLEAV-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.29 0.5kb upstream 0.5kb upstream 10083 true AmTr_v1.0_scaffold00002: 679538-689620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 679538-680037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 0.5kb downstream 0.5kb downstream 10083 true AmTr_v1.0_scaffold00002: 680038-690120 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 689621-690120 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 1.0kb upstream 1.0kb upstream 10583 true AmTr_v1.0_scaffold00002: 679038-689620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 679038-680037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 1.0kb downstream 1.0kb downstream 10583 true AmTr_v1.0_scaffold00002: 680038-690620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 689621-690620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 2.0kb upstream 2.0kb upstream 11583 true AmTr_v1.0_scaffold00002: 678038-689620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 678038-680037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 2.0kb downstream 2.0kb downstream 11583 true AmTr_v1.0_scaffold00002: 680038-691620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 689621-691620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 5.0kb upstream 5.0kb upstream 14583 true AmTr_v1.0_scaffold00002: 675038-689620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 675038-680037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 5.0kb downstream 5.0kb downstream 14583 true AmTr_v1.0_scaffold00002: 680038-694620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 689621-694620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 10.0kb upstream 10.0kb upstream 19583 true AmTr_v1.0_scaffold00002: 670038-689620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 670038-680037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 10.0kb downstream 10.0kb downstream 19583 true AmTr_v1.0_scaffold00002: 680038-699620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.29 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 689621-699620 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain