Gene : evm_27.TU.AmTr_v1.0_scaffold00002.271 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21091:SF18 - RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I Genomic Order:  270
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.271 Secondary Identifier:  ? PAC:31562727
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.271 0.5kb upstream 0.5kb upstream 6109 true AmTr_v1.0_scaffold00002: 5153925-5160033 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 5159534-5160033 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 0.5kb downstream 0.5kb downstream 6109 true AmTr_v1.0_scaffold00002: 5153425-5159533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 5153425-5153924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 1.0kb upstream 1.0kb upstream 6609 true AmTr_v1.0_scaffold00002: 5153925-5160533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 5159534-5160533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 1.0kb downstream 1.0kb downstream 6609 true AmTr_v1.0_scaffold00002: 5152925-5159533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 5152925-5153924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 2.0kb upstream 2.0kb upstream 7609 true AmTr_v1.0_scaffold00002: 5153925-5161533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 5159534-5161533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 2.0kb downstream 2.0kb downstream 7609 true AmTr_v1.0_scaffold00002: 5151925-5159533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 5151925-5153924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 5.0kb upstream 5.0kb upstream 10609 true AmTr_v1.0_scaffold00002: 5153925-5164533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 5159534-5164533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 5.0kb downstream 5.0kb downstream 10609 true AmTr_v1.0_scaffold00002: 5148925-5159533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 5148925-5153924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 10.0kb upstream 10.0kb upstream 15609 true AmTr_v1.0_scaffold00002: 5153925-5169533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 5159534-5169533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 10.0kb downstream 10.0kb downstream 15609 true AmTr_v1.0_scaffold00002: 5143925-5159533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.271 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 5143925-5153924 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain