Gene : evm_27.TU.AmTr_v1.0_scaffold00002.346 A. trichopoda v1.0
Defline:  (1 of 2) PTHR22953:SF22 - PURPLE ACID PHOSPHATASE 10 Genomic Order:  345
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.346 Secondary Identifier:  ? PAC:31562459
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5083 Amborella trichopoda pathologic  
Atrichopoda PWY-6348 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.346 0.5kb upstream 0.5kb upstream 5520 true AmTr_v1.0_scaffold00002: 6257089-6262608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 6262109-6262608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 0.5kb downstream 0.5kb downstream 5520 true AmTr_v1.0_scaffold00002: 6256589-6262108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 6256589-6257088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 1.0kb upstream 1.0kb upstream 6020 true AmTr_v1.0_scaffold00002: 6257089-6263108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 6262109-6263108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 1.0kb downstream 1.0kb downstream 6020 true AmTr_v1.0_scaffold00002: 6256089-6262108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 6256089-6257088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 2.0kb upstream 2.0kb upstream 7020 true AmTr_v1.0_scaffold00002: 6257089-6264108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 6262109-6264108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 2.0kb downstream 2.0kb downstream 7020 true AmTr_v1.0_scaffold00002: 6255089-6262108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 6255089-6257088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 5.0kb upstream 5.0kb upstream 10020 true AmTr_v1.0_scaffold00002: 6257089-6267108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 6262109-6267108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 5.0kb downstream 5.0kb downstream 10020 true AmTr_v1.0_scaffold00002: 6252089-6262108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 6252089-6257088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 10.0kb upstream 10.0kb upstream 15020 true AmTr_v1.0_scaffold00002: 6257089-6272108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 6262109-6272108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 10.0kb downstream 10.0kb downstream 15020 true AmTr_v1.0_scaffold00002: 6247089-6262108 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.346 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 6247089-6257088 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050360 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain