Gene : evm_27.TU.AmTr_v1.0_scaffold00002.200 A. trichopoda v1.0
Defline:  (1 of 1) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  200
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.200 Secondary Identifier:  ? PAC:31562896
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda LIPASYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.200 0.5kb upstream 0.5kb upstream 8524 true AmTr_v1.0_scaffold00002: 3832697-3841220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 3832697-3833196 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 0.5kb downstream 0.5kb downstream 8524 true AmTr_v1.0_scaffold00002: 3833197-3841720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 3841221-3841720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 1.0kb upstream 1.0kb upstream 9024 true AmTr_v1.0_scaffold00002: 3832197-3841220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 3832197-3833196 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 1.0kb downstream 1.0kb downstream 9024 true AmTr_v1.0_scaffold00002: 3833197-3842220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 3841221-3842220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 2.0kb upstream 2.0kb upstream 10024 true AmTr_v1.0_scaffold00002: 3831197-3841220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 3831197-3833196 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 2.0kb downstream 2.0kb downstream 10024 true AmTr_v1.0_scaffold00002: 3833197-3843220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 3841221-3843220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 5.0kb upstream 5.0kb upstream 13024 true AmTr_v1.0_scaffold00002: 3828197-3841220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 3828197-3833196 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 5.0kb downstream 5.0kb downstream 13024 true AmTr_v1.0_scaffold00002: 3833197-3846220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 3841221-3846220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 10.0kb upstream 10.0kb upstream 18024 true AmTr_v1.0_scaffold00002: 3823197-3841220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 3823197-3833196 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 10.0kb downstream 10.0kb downstream 18024 true AmTr_v1.0_scaffold00002: 3833197-3851220 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.200 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 3841221-3851220 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain