Gene : evm_27.TU.AmTr_v1.0_scaffold00002.172 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12459:SF7 - GB Genomic Order:  172
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.172 Secondary Identifier:  ? PAC:31562337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.172 0.5kb upstream 0.5kb upstream 9576 true AmTr_v1.0_scaffold00002: 3431404-3440979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 3431404-3431903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 0.5kb downstream 0.5kb downstream 9576 true AmTr_v1.0_scaffold00002: 3431904-3441479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 3440980-3441479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 1.0kb upstream 1.0kb upstream 10076 true AmTr_v1.0_scaffold00002: 3430904-3440979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 3430904-3431903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 1.0kb downstream 1.0kb downstream 10076 true AmTr_v1.0_scaffold00002: 3431904-3441979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 3440980-3441979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 2.0kb upstream 2.0kb upstream 11076 true AmTr_v1.0_scaffold00002: 3429904-3440979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 3429904-3431903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 2.0kb downstream 2.0kb downstream 11076 true AmTr_v1.0_scaffold00002: 3431904-3442979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 3440980-3442979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 5.0kb upstream 5.0kb upstream 14076 true AmTr_v1.0_scaffold00002: 3426904-3440979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 3426904-3431903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 5.0kb downstream 5.0kb downstream 14076 true AmTr_v1.0_scaffold00002: 3431904-3445979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 3440980-3445979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 10.0kb upstream 10.0kb upstream 19076 true AmTr_v1.0_scaffold00002: 3421904-3440979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 3421904-3431903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 10.0kb downstream 10.0kb downstream 19076 true AmTr_v1.0_scaffold00002: 3431904-3450979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.172 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 3440980-3450979 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047652 5273 Angiosperm View MSA
121343908 5274 Embryophyte View MSA
123425217 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain