Gene : evm_27.TU.AmTr_v1.0_scaffold00002.227 A. trichopoda v1.0
Defline:  (1 of 1) 2.4.1.260 - Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase / Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl alpha-6-mannosyltransferase Genomic Order:  226
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.227 Secondary Identifier:  ? PAC:31562802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.227 0.5kb upstream 0.5kb upstream 21837 true AmTr_v1.0_scaffold00002: 4210565-4232401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 4231902-4232401 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 0.5kb downstream 0.5kb downstream 21837 true AmTr_v1.0_scaffold00002: 4210065-4231901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 4210065-4210564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 1.0kb upstream 1.0kb upstream 22337 true AmTr_v1.0_scaffold00002: 4210565-4232901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 4231902-4232901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 1.0kb downstream 1.0kb downstream 22337 true AmTr_v1.0_scaffold00002: 4209565-4231901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 4209565-4210564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 2.0kb upstream 2.0kb upstream 23337 true AmTr_v1.0_scaffold00002: 4210565-4233901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 4231902-4233901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 2.0kb downstream 2.0kb downstream 23337 true AmTr_v1.0_scaffold00002: 4208565-4231901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 4208565-4210564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 5.0kb upstream 5.0kb upstream 26337 true AmTr_v1.0_scaffold00002: 4210565-4236901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 4231902-4236901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 5.0kb downstream 5.0kb downstream 26337 true AmTr_v1.0_scaffold00002: 4205565-4231901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 4205565-4210564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 10.0kb upstream 10.0kb upstream 31337 true AmTr_v1.0_scaffold00002: 4210565-4241901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 4231902-4241901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 10.0kb downstream 10.0kb downstream 31337 true AmTr_v1.0_scaffold00002: 4200565-4231901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.227 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 4200565-4210564 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046384 5273 Angiosperm View MSA
121345023 5274 Embryophyte View MSA
123424059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain