Gene : evm_27.TU.AmTr_v1.0_scaffold00002.22 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  22
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.22 Secondary Identifier:  ? PAC:31562260
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6351 Amborella trichopoda pathologic  
Atrichopoda PWY-6352 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.22 0.5kb upstream 0.5kb upstream 6021 true AmTr_v1.0_scaffold00002: 549959-555979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 555480-555979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 0.5kb downstream 0.5kb downstream 6021 true AmTr_v1.0_scaffold00002: 549459-555479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 549459-549958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 1.0kb upstream 1.0kb upstream 6521 true AmTr_v1.0_scaffold00002: 549959-556479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 555480-556479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 1.0kb downstream 1.0kb downstream 6521 true AmTr_v1.0_scaffold00002: 548959-555479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 548959-549958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 2.0kb upstream 2.0kb upstream 7521 true AmTr_v1.0_scaffold00002: 549959-557479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 555480-557479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 2.0kb downstream 2.0kb downstream 7521 true AmTr_v1.0_scaffold00002: 547959-555479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 547959-549958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 5.0kb upstream 5.0kb upstream 10521 true AmTr_v1.0_scaffold00002: 549959-560479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 555480-560479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 5.0kb downstream 5.0kb downstream 10521 true AmTr_v1.0_scaffold00002: 544959-555479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 544959-549958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 10.0kb upstream 10.0kb upstream 15521 true AmTr_v1.0_scaffold00002: 549959-565479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 555480-565479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 10.0kb downstream 10.0kb downstream 15521 true AmTr_v1.0_scaffold00002: 539959-555479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.22 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 539959-549958 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain