Gene : evm_27.TU.AmTr_v1.0_scaffold00001.7 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11465//PTHR11465:SF15 - CATALASE Genomic Order:  7
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.7 Secondary Identifier:  ? PAC:31551353
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda DETOX1-PWY Amborella trichopoda pathologic  
Atrichopoda DETOX1-PWY-1 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.7 0.5kb upstream 0.5kb upstream 9558 true AmTr_v1.0_scaffold00001: 112381-121938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 112381-112880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 0.5kb downstream 0.5kb downstream 9558 true AmTr_v1.0_scaffold00001: 112881-122438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 121939-122438 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 1.0kb upstream 1.0kb upstream 10058 true AmTr_v1.0_scaffold00001: 111881-121938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 111881-112880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 1.0kb downstream 1.0kb downstream 10058 true AmTr_v1.0_scaffold00001: 112881-122938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 121939-122938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 2.0kb upstream 2.0kb upstream 11058 true AmTr_v1.0_scaffold00001: 110881-121938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 110881-112880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 2.0kb downstream 2.0kb downstream 11058 true AmTr_v1.0_scaffold00001: 112881-123938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 121939-123938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 5.0kb upstream 5.0kb upstream 14058 true AmTr_v1.0_scaffold00001: 107881-121938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 107881-112880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 5.0kb downstream 5.0kb downstream 14058 true AmTr_v1.0_scaffold00001: 112881-126938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 121939-126938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 10.0kb upstream 10.0kb upstream 19058 true AmTr_v1.0_scaffold00001: 102881-121938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 102881-112880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 10.0kb downstream 10.0kb downstream 19058 true AmTr_v1.0_scaffold00001: 112881-131938 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.7 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 121939-131938 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050317 5273 Angiosperm View MSA
121311851 5274 Embryophyte View MSA
123349091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain