Gene : evm_27.TU.AmTr_v1.0_scaffold00001.593 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  582
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.593 Secondary Identifier:  ? PAC:31551199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.593 0.5kb upstream 0.5kb upstream 3035 true AmTr_v1.0_scaffold00001: 15803215-15806249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 15805750-15806249 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 0.5kb downstream 0.5kb downstream 3035 true AmTr_v1.0_scaffold00001: 15802715-15805749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 15802715-15803214 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 1.0kb upstream 1.0kb upstream 3535 true AmTr_v1.0_scaffold00001: 15803215-15806749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 15805750-15806749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 1.0kb downstream 1.0kb downstream 3535 true AmTr_v1.0_scaffold00001: 15802215-15805749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 15802215-15803214 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 2.0kb upstream 2.0kb upstream 4535 true AmTr_v1.0_scaffold00001: 15803215-15807749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 15805750-15807749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 2.0kb downstream 2.0kb downstream 4535 true AmTr_v1.0_scaffold00001: 15801215-15805749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 15801215-15803214 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 5.0kb upstream 5.0kb upstream 7535 true AmTr_v1.0_scaffold00001: 15803215-15810749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 15805750-15810749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 5.0kb downstream 5.0kb downstream 7535 true AmTr_v1.0_scaffold00001: 15798215-15805749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 15798215-15803214 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 10.0kb upstream 10.0kb upstream 12535 true AmTr_v1.0_scaffold00001: 15803215-15815749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 15805750-15815749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 10.0kb downstream 10.0kb downstream 12535 true AmTr_v1.0_scaffold00001: 15793215-15805749 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.593 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 15793215-15803214 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain