Gene : evm_27.TU.AmTr_v1.0_scaffold00001.590 A. trichopoda v1.0
Defline:  (1 of 8) PF07899 - Frigida-like protein (Frigida) Genomic Order:  579
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.590 Secondary Identifier:  ? PAC:31551385
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.590 0.5kb upstream 0.5kb upstream 3861 true AmTr_v1.0_scaffold00001: 15680402-15684262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 15680402-15680901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 0.5kb downstream 0.5kb downstream 3861 true AmTr_v1.0_scaffold00001: 15680902-15684762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 15684263-15684762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 1.0kb upstream 1.0kb upstream 4361 true AmTr_v1.0_scaffold00001: 15679902-15684262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 15679902-15680901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 1.0kb downstream 1.0kb downstream 4361 true AmTr_v1.0_scaffold00001: 15680902-15685262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 15684263-15685262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 2.0kb upstream 2.0kb upstream 5361 true AmTr_v1.0_scaffold00001: 15678902-15684262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 15678902-15680901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 2.0kb downstream 2.0kb downstream 5361 true AmTr_v1.0_scaffold00001: 15680902-15686262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 15684263-15686262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 5.0kb upstream 5.0kb upstream 8361 true AmTr_v1.0_scaffold00001: 15675902-15684262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 15675902-15680901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 5.0kb downstream 5.0kb downstream 8361 true AmTr_v1.0_scaffold00001: 15680902-15689262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 15684263-15689262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 10.0kb upstream 10.0kb upstream 13361 true AmTr_v1.0_scaffold00001: 15670902-15684262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 15670902-15680901 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 10.0kb downstream 10.0kb downstream 13361 true AmTr_v1.0_scaffold00001: 15680902-15694262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.590 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 15684263-15694262 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049415 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain