Gene : evm_27.TU.AmTr_v1.0_scaffold00003.182 A. trichopoda v1.0
Defline:  (1 of 1) PTHR16465 - NUCLEASE-RELATED Genomic Order:  178
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.182 Secondary Identifier:  ? PAC:31565423
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.182 0.5kb upstream 0.5kb upstream 2580 true AmTr_v1.0_scaffold00003: 3601736-3604315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 3601736-3602235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 0.5kb downstream 0.5kb downstream 2580 true AmTr_v1.0_scaffold00003: 3602236-3604815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 3604316-3604815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 1.0kb upstream 1.0kb upstream 3080 true AmTr_v1.0_scaffold00003: 3601236-3604315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 3601236-3602235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 1.0kb downstream 1.0kb downstream 3080 true AmTr_v1.0_scaffold00003: 3602236-3605315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 3604316-3605315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 2.0kb upstream 2.0kb upstream 4080 true AmTr_v1.0_scaffold00003: 3600236-3604315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 3600236-3602235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 2.0kb downstream 2.0kb downstream 4080 true AmTr_v1.0_scaffold00003: 3602236-3606315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 3604316-3606315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 5.0kb upstream 5.0kb upstream 7080 true AmTr_v1.0_scaffold00003: 3597236-3604315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 3597236-3602235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 5.0kb downstream 5.0kb downstream 7080 true AmTr_v1.0_scaffold00003: 3602236-3609315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 3604316-3609315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 10.0kb upstream 10.0kb upstream 12080 true AmTr_v1.0_scaffold00003: 3592236-3604315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 3592236-3602235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 10.0kb downstream 10.0kb downstream 12080 true AmTr_v1.0_scaffold00003: 3602236-3614315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.182 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 3604316-3614315 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain