Gene : evm_27.TU.AmTr_v1.0_scaffold00003.162 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10969:SF25 - AUTOPHAGY-RELATED PROTEIN 8I Genomic Order:  159
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.162 Secondary Identifier:  ? PAC:31565445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.162 0.5kb upstream 0.5kb upstream 2037 true AmTr_v1.0_scaffold00003: 3175712-3177748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 3177249-3177748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 0.5kb downstream 0.5kb downstream 2037 true AmTr_v1.0_scaffold00003: 3175212-3177248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 3175212-3175711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 1.0kb upstream 1.0kb upstream 2537 true AmTr_v1.0_scaffold00003: 3175712-3178248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 3177249-3178248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 1.0kb downstream 1.0kb downstream 2537 true AmTr_v1.0_scaffold00003: 3174712-3177248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 3174712-3175711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 2.0kb upstream 2.0kb upstream 3537 true AmTr_v1.0_scaffold00003: 3175712-3179248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 3177249-3179248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 2.0kb downstream 2.0kb downstream 3537 true AmTr_v1.0_scaffold00003: 3173712-3177248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 3173712-3175711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 5.0kb upstream 5.0kb upstream 6537 true AmTr_v1.0_scaffold00003: 3175712-3182248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 3177249-3182248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 5.0kb downstream 5.0kb downstream 6537 true AmTr_v1.0_scaffold00003: 3170712-3177248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 3170712-3175711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 10.0kb upstream 10.0kb upstream 11537 true AmTr_v1.0_scaffold00003: 3175712-3187248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 3177249-3187248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 10.0kb downstream 10.0kb downstream 11537 true AmTr_v1.0_scaffold00003: 3165712-3177248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.162 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 3165712-3175711 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain