Gene : evm_27.TU.AmTr_v1.0_scaffold00003.140 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11229:SF5 - 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC Genomic Order:  139
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.140 Secondary Identifier:  ? PAC:31565732
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.140 0.5kb upstream 0.5kb upstream 5225 true AmTr_v1.0_scaffold00003: 2621324-2626548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 2621324-2621823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 0.5kb downstream 0.5kb downstream 5225 true AmTr_v1.0_scaffold00003: 2621824-2627048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 2626549-2627048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 1.0kb upstream 1.0kb upstream 5725 true AmTr_v1.0_scaffold00003: 2620824-2626548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 2620824-2621823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 1.0kb downstream 1.0kb downstream 5725 true AmTr_v1.0_scaffold00003: 2621824-2627548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 2626549-2627548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 2.0kb upstream 2.0kb upstream 6725 true AmTr_v1.0_scaffold00003: 2619824-2626548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 2619824-2621823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 2.0kb downstream 2.0kb downstream 6725 true AmTr_v1.0_scaffold00003: 2621824-2628548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 2626549-2628548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 5.0kb upstream 5.0kb upstream 9725 true AmTr_v1.0_scaffold00003: 2616824-2626548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 2616824-2621823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 5.0kb downstream 5.0kb downstream 9725 true AmTr_v1.0_scaffold00003: 2621824-2631548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 2626549-2631548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 10.0kb upstream 10.0kb upstream 14725 true AmTr_v1.0_scaffold00003: 2611824-2626548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 2611824-2621823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 10.0kb downstream 10.0kb downstream 14725 true AmTr_v1.0_scaffold00003: 2621824-2636548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.140 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 2626549-2636548 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045324 5273 Angiosperm View MSA
121345388 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain