Gene : evm_27.TU.AmTr_v1.0_scaffold00003.122 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11081:SF9 - FLAP ENDONUCLEASE 1 Genomic Order:  121
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.122 Secondary Identifier:  ? PAC:31565616
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.122 0.5kb upstream 0.5kb upstream 12197 true AmTr_v1.0_scaffold00003: 2221479-2233675 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 2233176-2233675 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 0.5kb downstream 0.5kb downstream 12197 true AmTr_v1.0_scaffold00003: 2220979-2233175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 2220979-2221478 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 1.0kb upstream 1.0kb upstream 12697 true AmTr_v1.0_scaffold00003: 2221479-2234175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 2233176-2234175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 1.0kb downstream 1.0kb downstream 12697 true AmTr_v1.0_scaffold00003: 2220479-2233175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 2220479-2221478 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 2.0kb upstream 2.0kb upstream 13697 true AmTr_v1.0_scaffold00003: 2221479-2235175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 2233176-2235175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 2.0kb downstream 2.0kb downstream 13697 true AmTr_v1.0_scaffold00003: 2219479-2233175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 2219479-2221478 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 5.0kb upstream 5.0kb upstream 16697 true AmTr_v1.0_scaffold00003: 2221479-2238175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 2233176-2238175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 5.0kb downstream 5.0kb downstream 16697 true AmTr_v1.0_scaffold00003: 2216479-2233175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 2216479-2221478 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 10.0kb upstream 10.0kb upstream 21697 true AmTr_v1.0_scaffold00003: 2221479-2243175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 2233176-2243175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 10.0kb downstream 10.0kb downstream 21697 true AmTr_v1.0_scaffold00003: 2211479-2233175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.122 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 2211479-2221478 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain