Gene : evm_27.TU.AmTr_v1.0_scaffold00002.594 A. trichopoda v1.0
Defline:  (1 of 1) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  588
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.594 Secondary Identifier:  ? PAC:31562555
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-4361 Amborella trichopoda pathologic  
Atrichopoda PWY-5389 Amborella trichopoda pathologic  
Atrichopoda PWY-7270 Amborella trichopoda pathologic  
Atrichopoda PWY-7528 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.594 0.5kb upstream 0.5kb upstream 3856 true AmTr_v1.0_scaffold00002: 10347694-10351549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 10351050-10351549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 0.5kb downstream 0.5kb downstream 3856 true AmTr_v1.0_scaffold00002: 10347194-10351049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 10347194-10347693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 1.0kb upstream 1.0kb upstream 4356 true AmTr_v1.0_scaffold00002: 10347694-10352049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 10351050-10352049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 1.0kb downstream 1.0kb downstream 4356 true AmTr_v1.0_scaffold00002: 10346694-10351049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 10346694-10347693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 2.0kb upstream 2.0kb upstream 5356 true AmTr_v1.0_scaffold00002: 10347694-10353049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 10351050-10353049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 2.0kb downstream 2.0kb downstream 5356 true AmTr_v1.0_scaffold00002: 10345694-10351049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 10345694-10347693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 5.0kb upstream 5.0kb upstream 8356 true AmTr_v1.0_scaffold00002: 10347694-10356049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 10351050-10356049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 5.0kb downstream 5.0kb downstream 8356 true AmTr_v1.0_scaffold00002: 10342694-10351049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 10342694-10347693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 10.0kb upstream 10.0kb upstream 13356 true AmTr_v1.0_scaffold00002: 10347694-10361049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 10351050-10361049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 10.0kb downstream 10.0kb downstream 13356 true AmTr_v1.0_scaffold00002: 10337694-10351049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.594 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 10337694-10347693 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain