Gene : evm_27.TU.AmTr_v1.0_scaffold00002.593 A. trichopoda v1.0
Defline:  (1 of 2) 1.13.11.54 - Acireductone dioxygenase (Fe(2+)-requiring) / E-2' Genomic Order:  587
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.593 Secondary Identifier:  ? PAC:31562322
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-4361 Amborella trichopoda pathologic  
Atrichopoda PWY-7270 Amborella trichopoda pathologic  
Atrichopoda PWY-7528 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.593 0.5kb upstream 0.5kb upstream 4933 true AmTr_v1.0_scaffold00002: 10338274-10343206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 10342707-10343206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 0.5kb downstream 0.5kb downstream 4933 true AmTr_v1.0_scaffold00002: 10337774-10342706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 10337774-10338273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 1.0kb upstream 1.0kb upstream 5433 true AmTr_v1.0_scaffold00002: 10338274-10343706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 10342707-10343706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 1.0kb downstream 1.0kb downstream 5433 true AmTr_v1.0_scaffold00002: 10337274-10342706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 10337274-10338273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 2.0kb upstream 2.0kb upstream 6433 true AmTr_v1.0_scaffold00002: 10338274-10344706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 10342707-10344706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 2.0kb downstream 2.0kb downstream 6433 true AmTr_v1.0_scaffold00002: 10336274-10342706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 10336274-10338273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 5.0kb upstream 5.0kb upstream 9433 true AmTr_v1.0_scaffold00002: 10338274-10347706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 10342707-10347706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 5.0kb downstream 5.0kb downstream 9433 true AmTr_v1.0_scaffold00002: 10333274-10342706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 10333274-10338273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 10.0kb upstream 10.0kb upstream 14433 true AmTr_v1.0_scaffold00002: 10338274-10352706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 10342707-10352706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 10.0kb downstream 10.0kb downstream 14433 true AmTr_v1.0_scaffold00002: 10328274-10342706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.593 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 10328274-10338273 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain