Gene : evm_27.TU.AmTr_v1.0_scaffold00002.581 A. trichopoda v1.0
Defline:  (1 of 14) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  575
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.581 Secondary Identifier:  ? PAC:31562629
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.581 0.5kb upstream 0.5kb upstream 3335 true AmTr_v1.0_scaffold00002: 10149467-10152801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 10149467-10149966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 0.5kb downstream 0.5kb downstream 3335 true AmTr_v1.0_scaffold00002: 10149967-10153301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 10152802-10153301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 1.0kb upstream 1.0kb upstream 3835 true AmTr_v1.0_scaffold00002: 10148967-10152801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 10148967-10149966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 1.0kb downstream 1.0kb downstream 3835 true AmTr_v1.0_scaffold00002: 10149967-10153801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 10152802-10153801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 2.0kb upstream 2.0kb upstream 4835 true AmTr_v1.0_scaffold00002: 10147967-10152801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 10147967-10149966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 2.0kb downstream 2.0kb downstream 4835 true AmTr_v1.0_scaffold00002: 10149967-10154801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 10152802-10154801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 5.0kb upstream 5.0kb upstream 7835 true AmTr_v1.0_scaffold00002: 10144967-10152801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 10144967-10149966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 5.0kb downstream 5.0kb downstream 7835 true AmTr_v1.0_scaffold00002: 10149967-10157801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 10152802-10157801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 10.0kb upstream 10.0kb upstream 12835 true AmTr_v1.0_scaffold00002: 10139967-10152801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 10139967-10149966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 10.0kb downstream 10.0kb downstream 12835 true AmTr_v1.0_scaffold00002: 10149967-10162801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.581 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 10152802-10162801 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain