Gene : evm_27.TU.AmTr_v1.0_scaffold00002.408 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  405
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.408 Secondary Identifier:  ? PAC:31562319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.408 0.5kb upstream 0.5kb upstream 5108 true AmTr_v1.0_scaffold00002: 7060151-7065258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 7064759-7065258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 0.5kb downstream 0.5kb downstream 5108 true AmTr_v1.0_scaffold00002: 7059651-7064758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 7059651-7060150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 1.0kb upstream 1.0kb upstream 5608 true AmTr_v1.0_scaffold00002: 7060151-7065758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 7064759-7065758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 1.0kb downstream 1.0kb downstream 5608 true AmTr_v1.0_scaffold00002: 7059151-7064758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 7059151-7060150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 2.0kb upstream 2.0kb upstream 6608 true AmTr_v1.0_scaffold00002: 7060151-7066758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 7064759-7066758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 2.0kb downstream 2.0kb downstream 6608 true AmTr_v1.0_scaffold00002: 7058151-7064758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 7058151-7060150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 5.0kb upstream 5.0kb upstream 9608 true AmTr_v1.0_scaffold00002: 7060151-7069758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 7064759-7069758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 5.0kb downstream 5.0kb downstream 9608 true AmTr_v1.0_scaffold00002: 7055151-7064758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 7055151-7060150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 10.0kb upstream 10.0kb upstream 14608 true AmTr_v1.0_scaffold00002: 7060151-7074758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 7064759-7074758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 10.0kb downstream 10.0kb downstream 14608 true AmTr_v1.0_scaffold00002: 7050151-7064758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.408 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 7050151-7060150 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain