Gene : evm_27.TU.AmTr_v1.0_scaffold00002.418 A. trichopoda v1.0
Defline:  (1 of 78) PF02458 - Transferase family (Transferase) Genomic Order:  413
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.418 Secondary Identifier:  ? PAC:31562460
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.418 0.5kb upstream 0.5kb upstream 1808 true AmTr_v1.0_scaffold00002: 7202235-7204042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 7202235-7202734 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 0.5kb downstream 0.5kb downstream 1808 true AmTr_v1.0_scaffold00002: 7202735-7204542 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 7204043-7204542 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 1.0kb upstream 1.0kb upstream 2308 true AmTr_v1.0_scaffold00002: 7201735-7204042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 7201735-7202734 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 1.0kb downstream 1.0kb downstream 2308 true AmTr_v1.0_scaffold00002: 7202735-7205042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 7204043-7205042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 2.0kb upstream 2.0kb upstream 3308 true AmTr_v1.0_scaffold00002: 7200735-7204042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 7200735-7202734 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 2.0kb downstream 2.0kb downstream 3308 true AmTr_v1.0_scaffold00002: 7202735-7206042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 7204043-7206042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 5.0kb upstream 5.0kb upstream 6308 true AmTr_v1.0_scaffold00002: 7197735-7204042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 7197735-7202734 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 5.0kb downstream 5.0kb downstream 6308 true AmTr_v1.0_scaffold00002: 7202735-7209042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 7204043-7209042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 10.0kb upstream 10.0kb upstream 11308 true AmTr_v1.0_scaffold00002: 7192735-7204042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 7192735-7202734 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 10.0kb downstream 10.0kb downstream 11308 true AmTr_v1.0_scaffold00002: 7202735-7214042 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.418 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 7204043-7214042 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051149 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain