Gene : evm_27.TU.AmTr_v1.0_scaffold00004.127 A. trichopoda v1.0
Defline:  (1 of 1) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Genomic Order:  127
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.127 Secondary Identifier:  ? PAC:31550567
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.127 0.5kb upstream 0.5kb upstream 1379 true AmTr_v1.0_scaffold00004: 1845180-1846558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 1846059-1846558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 0.5kb downstream 0.5kb downstream 1379 true AmTr_v1.0_scaffold00004: 1844680-1846058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 1844680-1845179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 1.0kb upstream 1.0kb upstream 1879 true AmTr_v1.0_scaffold00004: 1845180-1847058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 1846059-1847058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 1.0kb downstream 1.0kb downstream 1879 true AmTr_v1.0_scaffold00004: 1844180-1846058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 1844180-1845179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 2.0kb upstream 2.0kb upstream 2879 true AmTr_v1.0_scaffold00004: 1845180-1848058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 1846059-1848058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 2.0kb downstream 2.0kb downstream 2879 true AmTr_v1.0_scaffold00004: 1843180-1846058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 1843180-1845179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 5.0kb upstream 5.0kb upstream 5879 true AmTr_v1.0_scaffold00004: 1845180-1851058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 1846059-1851058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 5.0kb downstream 5.0kb downstream 5879 true AmTr_v1.0_scaffold00004: 1840180-1846058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 1840180-1845179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 10.0kb upstream 10.0kb upstream 10879 true AmTr_v1.0_scaffold00004: 1845180-1856058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 1846059-1856058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 10.0kb downstream 10.0kb downstream 10879 true AmTr_v1.0_scaffold00004: 1835180-1846058 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.127 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 1835180-1845179 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain