Gene : evm_27.TU.AmTr_v1.0_scaffold00004.172 A. trichopoda v1.0
Defline:  (1 of 1) KOG1968 - Replication factor C, subunit RFC1 (large subunit) Genomic Order:  172
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.172 Secondary Identifier:  ? PAC:31550310
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.172 0.5kb upstream 0.5kb upstream 8009 true AmTr_v1.0_scaffold00004: 2469541-2477549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 2477050-2477549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 0.5kb downstream 0.5kb downstream 8009 true AmTr_v1.0_scaffold00004: 2469041-2477049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 2469041-2469540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 1.0kb upstream 1.0kb upstream 8509 true AmTr_v1.0_scaffold00004: 2469541-2478049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 2477050-2478049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 1.0kb downstream 1.0kb downstream 8509 true AmTr_v1.0_scaffold00004: 2468541-2477049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 2468541-2469540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 2.0kb upstream 2.0kb upstream 9509 true AmTr_v1.0_scaffold00004: 2469541-2479049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 2477050-2479049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 2.0kb downstream 2.0kb downstream 9509 true AmTr_v1.0_scaffold00004: 2467541-2477049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 2467541-2469540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 5.0kb upstream 5.0kb upstream 12509 true AmTr_v1.0_scaffold00004: 2469541-2482049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 2477050-2482049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 5.0kb downstream 5.0kb downstream 12509 true AmTr_v1.0_scaffold00004: 2464541-2477049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 2464541-2469540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 10.0kb upstream 10.0kb upstream 17509 true AmTr_v1.0_scaffold00004: 2469541-2487049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 2477050-2487049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 10.0kb downstream 10.0kb downstream 17509 true AmTr_v1.0_scaffold00004: 2459541-2477049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.172 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 2459541-2469540 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041518 5273 Angiosperm View MSA
121345302 5274 Embryophyte View MSA
123425414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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