Gene : evm_27.TU.AmTr_v1.0_scaffold00004.157 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12709:SF4 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 Genomic Order:  157
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.157 Secondary Identifier:  ? PAC:31550529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.157 0.5kb upstream 0.5kb upstream 5865 true AmTr_v1.0_scaffold00004: 2230934-2236798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 2230934-2231433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 0.5kb downstream 0.5kb downstream 5865 true AmTr_v1.0_scaffold00004: 2231434-2237298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 2236799-2237298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 1.0kb upstream 1.0kb upstream 6365 true AmTr_v1.0_scaffold00004: 2230434-2236798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 2230434-2231433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 1.0kb downstream 1.0kb downstream 6365 true AmTr_v1.0_scaffold00004: 2231434-2237798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 2236799-2237798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 2.0kb upstream 2.0kb upstream 7365 true AmTr_v1.0_scaffold00004: 2229434-2236798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 2229434-2231433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 2.0kb downstream 2.0kb downstream 7365 true AmTr_v1.0_scaffold00004: 2231434-2238798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 2236799-2238798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 5.0kb upstream 5.0kb upstream 10365 true AmTr_v1.0_scaffold00004: 2226434-2236798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 2226434-2231433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 5.0kb downstream 5.0kb downstream 10365 true AmTr_v1.0_scaffold00004: 2231434-2241798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 2236799-2241798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 10.0kb upstream 10.0kb upstream 15365 true AmTr_v1.0_scaffold00004: 2221434-2236798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 2221434-2231433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 10.0kb downstream 10.0kb downstream 15365 true AmTr_v1.0_scaffold00004: 2231434-2246798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.157 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 2236799-2246798 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain