Gene : evm_27.TU.AmTr_v1.0_scaffold00004.144 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23024//PTHR23024:SF189 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  144
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.144 Secondary Identifier:  ? PAC:31550384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6303 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.144 0.5kb upstream 0.5kb upstream 1484 true AmTr_v1.0_scaffold00004: 2137283-2138766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 2137283-2137782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 0.5kb downstream 0.5kb downstream 1484 true AmTr_v1.0_scaffold00004: 2137783-2139266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 2138767-2139266 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 1.0kb upstream 1.0kb upstream 1984 true AmTr_v1.0_scaffold00004: 2136783-2138766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 2136783-2137782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 1.0kb downstream 1.0kb downstream 1984 true AmTr_v1.0_scaffold00004: 2137783-2139766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 2138767-2139766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 2.0kb upstream 2.0kb upstream 2984 true AmTr_v1.0_scaffold00004: 2135783-2138766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 2135783-2137782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 2.0kb downstream 2.0kb downstream 2984 true AmTr_v1.0_scaffold00004: 2137783-2140766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 2138767-2140766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 5.0kb upstream 5.0kb upstream 5984 true AmTr_v1.0_scaffold00004: 2132783-2138766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 2132783-2137782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 5.0kb downstream 5.0kb downstream 5984 true AmTr_v1.0_scaffold00004: 2137783-2143766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 2138767-2143766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 10.0kb upstream 10.0kb upstream 10984 true AmTr_v1.0_scaffold00004: 2127783-2138766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 2127783-2137782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 10.0kb downstream 10.0kb downstream 10984 true AmTr_v1.0_scaffold00004: 2137783-2148766 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.144 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 2138767-2148766 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain