Gene : evm_27.TU.AmTr_v1.0_scaffold00003.39 A. trichopoda v1.0

Defline:  (1 of 1) PTHR36044:SF1 - HEME BINDING PROTEIN Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.39 Secondary Identifier:  ? PAC:31565697

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.39 0.5kb upstream 0.5kb upstream 5410 true AmTr_v1.0_scaffold00003: 753059-758468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 753059-753558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 0.5kb downstream 0.5kb downstream 5410 true AmTr_v1.0_scaffold00003: 753559-758968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 758469-758968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 1.0kb upstream 1.0kb upstream 5910 true AmTr_v1.0_scaffold00003: 752559-758468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 752559-753558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 1.0kb downstream 1.0kb downstream 5910 true AmTr_v1.0_scaffold00003: 753559-759468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 758469-759468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 2.0kb upstream 2.0kb upstream 6910 true AmTr_v1.0_scaffold00003: 751559-758468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 751559-753558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 2.0kb downstream 2.0kb downstream 6910 true AmTr_v1.0_scaffold00003: 753559-760468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 758469-760468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 5.0kb upstream 5.0kb upstream 9910 true AmTr_v1.0_scaffold00003: 748559-758468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 748559-753558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 5.0kb downstream 5.0kb downstream 9910 true AmTr_v1.0_scaffold00003: 753559-763468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 758469-763468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 10.0kb upstream 10.0kb upstream 14910 true AmTr_v1.0_scaffold00003: 743559-758468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 743559-753558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 10.0kb downstream 10.0kb downstream 14910 true AmTr_v1.0_scaffold00003: 753559-768468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 758469-768468 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041410 5273 Angiosperm View MSA
121347553 5274 Embryophyte View MSA
123380570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain