Gene : evm_27.TU.AmTr_v1.0_scaffold00003.307 A. trichopoda v1.0
Defline:  (1 of 2) 2.7.6.2 - Thiamine diphosphokinase / Thiamine pyrophosphokinase Genomic Order:  301
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.307 Secondary Identifier:  ? PAC:31565734
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6908 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.307 0.5kb upstream 0.5kb upstream 28357 true AmTr_v1.0_scaffold00003: 6647699-6676055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 6675556-6676055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 0.5kb downstream 0.5kb downstream 28357 true AmTr_v1.0_scaffold00003: 6647199-6675555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 6647199-6647698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 1.0kb upstream 1.0kb upstream 28857 true AmTr_v1.0_scaffold00003: 6647699-6676555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 6675556-6676555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 1.0kb downstream 1.0kb downstream 28857 true AmTr_v1.0_scaffold00003: 6646699-6675555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 6646699-6647698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 2.0kb upstream 2.0kb upstream 29857 true AmTr_v1.0_scaffold00003: 6647699-6677555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 6675556-6677555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 2.0kb downstream 2.0kb downstream 29857 true AmTr_v1.0_scaffold00003: 6645699-6675555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 6645699-6647698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 5.0kb upstream 5.0kb upstream 32857 true AmTr_v1.0_scaffold00003: 6647699-6680555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 6675556-6680555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 5.0kb downstream 5.0kb downstream 32857 true AmTr_v1.0_scaffold00003: 6642699-6675555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 6642699-6647698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 10.0kb upstream 10.0kb upstream 37857 true AmTr_v1.0_scaffold00003: 6647699-6685555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 6675556-6685555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 10.0kb downstream 10.0kb downstream 37857 true AmTr_v1.0_scaffold00003: 6637699-6675555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.307 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 6637699-6647698 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain