Gene : evm_27.TU.AmTr_v1.0_scaffold00003.282 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11452//PTHR11452:SF36 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Genomic Order:  276
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.282 Secondary Identifier:  ? PAC:31565568
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1301 Amborella trichopoda pathologic  
Atrichopoda PWY-6527 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.282 0.5kb upstream 0.5kb upstream 3023 true AmTr_v1.0_scaffold00003: 6020596-6023618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 6020596-6021095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 0.5kb downstream 0.5kb downstream 3023 true AmTr_v1.0_scaffold00003: 6021096-6024118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 6023619-6024118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 1.0kb upstream 1.0kb upstream 3523 true AmTr_v1.0_scaffold00003: 6020096-6023618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 6020096-6021095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 1.0kb downstream 1.0kb downstream 3523 true AmTr_v1.0_scaffold00003: 6021096-6024618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 6023619-6024618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 2.0kb upstream 2.0kb upstream 4523 true AmTr_v1.0_scaffold00003: 6019096-6023618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 6019096-6021095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 2.0kb downstream 2.0kb downstream 4523 true AmTr_v1.0_scaffold00003: 6021096-6025618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 6023619-6025618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 5.0kb upstream 5.0kb upstream 7523 true AmTr_v1.0_scaffold00003: 6016096-6023618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 6016096-6021095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 5.0kb downstream 5.0kb downstream 7523 true AmTr_v1.0_scaffold00003: 6021096-6028618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 6023619-6028618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 10.0kb upstream 10.0kb upstream 12523 true AmTr_v1.0_scaffold00003: 6011096-6023618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 6011096-6021095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 10.0kb downstream 10.0kb downstream 12523 true AmTr_v1.0_scaffold00003: 6021096-6033618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.282 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 6023619-6033618 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050018 5273 Angiosperm View MSA
123429243 5275 Viridiplantae View MSA
121311687 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain