Gene : evm_27.TU.AmTr_v1.0_scaffold00003.382 A. trichopoda v1.0
Defline:  (1 of 2) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  375
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.382 Secondary Identifier:  ? PAC:31565493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5129 Amborella trichopoda pathologic  
Atrichopoda PWY-6483 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.382 0.5kb upstream 0.5kb upstream 13081 true AmTr_v1.0_scaffold00003: 8799349-8812429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 8811930-8812429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 0.5kb downstream 0.5kb downstream 13081 true AmTr_v1.0_scaffold00003: 8798849-8811929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 8798849-8799348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 1.0kb upstream 1.0kb upstream 13581 true AmTr_v1.0_scaffold00003: 8799349-8812929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 8811930-8812929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 1.0kb downstream 1.0kb downstream 13581 true AmTr_v1.0_scaffold00003: 8798349-8811929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 8798349-8799348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 2.0kb upstream 2.0kb upstream 14581 true AmTr_v1.0_scaffold00003: 8799349-8813929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 8811930-8813929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 2.0kb downstream 2.0kb downstream 14581 true AmTr_v1.0_scaffold00003: 8797349-8811929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 8797349-8799348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 5.0kb upstream 5.0kb upstream 17581 true AmTr_v1.0_scaffold00003: 8799349-8816929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 8811930-8816929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 5.0kb downstream 5.0kb downstream 17581 true AmTr_v1.0_scaffold00003: 8794349-8811929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 8794349-8799348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 10.0kb upstream 10.0kb upstream 22581 true AmTr_v1.0_scaffold00003: 8799349-8821929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 8811930-8821929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 10.0kb downstream 10.0kb downstream 22581 true AmTr_v1.0_scaffold00003: 8789349-8811929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.382 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 8789349-8799348 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain