Gene : evm_27.TU.AmTr_v1.0_scaffold00003.356 A. trichopoda v1.0
Defline:  (1 of 1) KOG3490 - Transcription elongation factor SPT4 Genomic Order:  349
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.356 Secondary Identifier:  ? PAC:31565353
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.356 0.5kb upstream 0.5kb upstream 23776 true AmTr_v1.0_scaffold00003: 8248579-8272354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 8248579-8249078 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 0.5kb downstream 0.5kb downstream 23776 true AmTr_v1.0_scaffold00003: 8249079-8272854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 8272355-8272854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 1.0kb upstream 1.0kb upstream 24276 true AmTr_v1.0_scaffold00003: 8248079-8272354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 8248079-8249078 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 1.0kb downstream 1.0kb downstream 24276 true AmTr_v1.0_scaffold00003: 8249079-8273354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 8272355-8273354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 2.0kb upstream 2.0kb upstream 25276 true AmTr_v1.0_scaffold00003: 8247079-8272354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 8247079-8249078 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 2.0kb downstream 2.0kb downstream 25276 true AmTr_v1.0_scaffold00003: 8249079-8274354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 8272355-8274354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 5.0kb upstream 5.0kb upstream 28276 true AmTr_v1.0_scaffold00003: 8244079-8272354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 8244079-8249078 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 5.0kb downstream 5.0kb downstream 28276 true AmTr_v1.0_scaffold00003: 8249079-8277354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 8272355-8277354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 10.0kb upstream 10.0kb upstream 33276 true AmTr_v1.0_scaffold00003: 8239079-8272354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 8239079-8249078 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 10.0kb downstream 10.0kb downstream 33276 true AmTr_v1.0_scaffold00003: 8249079-8282354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.356 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 8272355-8282354 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain