Gene : evm_27.TU.AmTr_v1.0_scaffold00003.353 A. trichopoda v1.0
Defline:  (1 of 2) PF04410 - Gar1/Naf1 RNA binding region (Gar1) Genomic Order:  346
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.353 Secondary Identifier:  ? PAC:31565649
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.353 0.5kb upstream 0.5kb upstream 7077 true AmTr_v1.0_scaffold00003: 8165891-8172967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 8165891-8166390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 0.5kb downstream 0.5kb downstream 7077 true AmTr_v1.0_scaffold00003: 8166391-8173467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 8172968-8173467 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 1.0kb upstream 1.0kb upstream 7577 true AmTr_v1.0_scaffold00003: 8165391-8172967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 8165391-8166390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 1.0kb downstream 1.0kb downstream 7577 true AmTr_v1.0_scaffold00003: 8166391-8173967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 8172968-8173967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 2.0kb upstream 2.0kb upstream 8577 true AmTr_v1.0_scaffold00003: 8164391-8172967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 8164391-8166390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 2.0kb downstream 2.0kb downstream 8577 true AmTr_v1.0_scaffold00003: 8166391-8174967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 8172968-8174967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 5.0kb upstream 5.0kb upstream 11577 true AmTr_v1.0_scaffold00003: 8161391-8172967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 8161391-8166390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 5.0kb downstream 5.0kb downstream 11577 true AmTr_v1.0_scaffold00003: 8166391-8177967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 8172968-8177967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 10.0kb upstream 10.0kb upstream 16577 true AmTr_v1.0_scaffold00003: 8156391-8172967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 8156391-8166390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 10.0kb downstream 10.0kb downstream 16577 true AmTr_v1.0_scaffold00003: 8166391-8182967 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.353 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 8172968-8182967 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041036 5273 Angiosperm View MSA
121343792 5274 Embryophyte View MSA
123424387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain