Gene : evm_27.TU.AmTr_v1.0_scaffold00006.223 A. trichopoda v1.0
Defline:  (1 of 3) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Genomic Order:  220
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.223 Secondary Identifier:  ? PAC:31560223
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.223 0.5kb upstream 0.5kb upstream 13898 true AmTr_v1.0_scaffold00006: 7640605-7654502 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 7654003-7654502 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 0.5kb downstream 0.5kb downstream 13898 true AmTr_v1.0_scaffold00006: 7640105-7654002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 7640105-7640604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 1.0kb upstream 1.0kb upstream 14398 true AmTr_v1.0_scaffold00006: 7640605-7655002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 7654003-7655002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 1.0kb downstream 1.0kb downstream 14398 true AmTr_v1.0_scaffold00006: 7639605-7654002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 7639605-7640604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 2.0kb upstream 2.0kb upstream 15398 true AmTr_v1.0_scaffold00006: 7640605-7656002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 7654003-7656002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 2.0kb downstream 2.0kb downstream 15398 true AmTr_v1.0_scaffold00006: 7638605-7654002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 7638605-7640604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 5.0kb upstream 5.0kb upstream 18398 true AmTr_v1.0_scaffold00006: 7640605-7659002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 7654003-7659002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 5.0kb downstream 5.0kb downstream 18398 true AmTr_v1.0_scaffold00006: 7635605-7654002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 7635605-7640604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 10.0kb upstream 10.0kb upstream 23398 true AmTr_v1.0_scaffold00006: 7640605-7664002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 7654003-7664002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 10.0kb downstream 10.0kb downstream 23398 true AmTr_v1.0_scaffold00006: 7630605-7654002 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.223 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 7630605-7640604 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain