Gene : evm_27.TU.AmTr_v1.0_scaffold00005.232 A. trichopoda v1.0
Defline:  (1 of 1) 2.7.1.35 - Pyridoxal kinase / Vitamin B6 kinase Genomic Order:  229
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.232 Secondary Identifier:  ? PAC:31576068
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PLPSAL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-7204 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.232 0.5kb upstream 0.5kb upstream 60454 true AmTr_v1.0_scaffold00005: 8732856-8793309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 8732856-8733355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 0.5kb downstream 0.5kb downstream 60454 true AmTr_v1.0_scaffold00005: 8733356-8793809 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 8793310-8793809 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 1.0kb upstream 1.0kb upstream 60954 true AmTr_v1.0_scaffold00005: 8732356-8793309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 8732356-8733355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 1.0kb downstream 1.0kb downstream 60954 true AmTr_v1.0_scaffold00005: 8733356-8794309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 8793310-8794309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 2.0kb upstream 2.0kb upstream 61954 true AmTr_v1.0_scaffold00005: 8731356-8793309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 8731356-8733355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 2.0kb downstream 2.0kb downstream 61954 true AmTr_v1.0_scaffold00005: 8733356-8795309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 8793310-8795309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 5.0kb upstream 5.0kb upstream 64954 true AmTr_v1.0_scaffold00005: 8728356-8793309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 8728356-8733355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 5.0kb downstream 5.0kb downstream 64954 true AmTr_v1.0_scaffold00005: 8733356-8798309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 8793310-8798309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 10.0kb upstream 10.0kb upstream 69954 true AmTr_v1.0_scaffold00005: 8723356-8793309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 8723356-8733355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 10.0kb downstream 10.0kb downstream 69954 true AmTr_v1.0_scaffold00005: 8733356-8803309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.232 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 8793310-8803309 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041254 5273 Angiosperm View MSA
121343992 5274 Embryophyte View MSA
123424981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain