Gene : evm_27.TU.AmTr_v1.0_scaffold00005.221 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11081:SF27 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  218
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.221 Secondary Identifier:  ? PAC:31575898
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.221 0.5kb upstream 0.5kb upstream 5889 true AmTr_v1.0_scaffold00005: 8446712-8452600 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 8452101-8452600 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 0.5kb downstream 0.5kb downstream 5889 true AmTr_v1.0_scaffold00005: 8446212-8452100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 8446212-8446711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 1.0kb upstream 1.0kb upstream 6389 true AmTr_v1.0_scaffold00005: 8446712-8453100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 8452101-8453100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 1.0kb downstream 1.0kb downstream 6389 true AmTr_v1.0_scaffold00005: 8445712-8452100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 8445712-8446711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 2.0kb upstream 2.0kb upstream 7389 true AmTr_v1.0_scaffold00005: 8446712-8454100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 8452101-8454100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 2.0kb downstream 2.0kb downstream 7389 true AmTr_v1.0_scaffold00005: 8444712-8452100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 8444712-8446711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 5.0kb upstream 5.0kb upstream 10389 true AmTr_v1.0_scaffold00005: 8446712-8457100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 8452101-8457100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 5.0kb downstream 5.0kb downstream 10389 true AmTr_v1.0_scaffold00005: 8441712-8452100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 8441712-8446711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 10.0kb upstream 10.0kb upstream 15389 true AmTr_v1.0_scaffold00005: 8446712-8462100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 8452101-8462100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 10.0kb downstream 10.0kb downstream 15389 true AmTr_v1.0_scaffold00005: 8436712-8452100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.221 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 8436712-8446711 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050506 5273 Angiosperm View MSA
121349640 5274 Embryophyte View MSA
123426218 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain