Gene : evm_27.TU.AmTr_v1.0_scaffold00005.194 A. trichopoda v1.0
Defline:  (1 of 1) PTHR18896:SF79 - PHOSPHOLIPASE D EPSILON Genomic Order:  191
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.194 Secondary Identifier:  ? PAC:31576075
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda LIPASYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3561 Amborella trichopoda pathologic  
Atrichopoda PWY-7039 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.194 0.5kb upstream 0.5kb upstream 3579 true AmTr_v1.0_scaffold00005: 7698241-7701819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 7701320-7701819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 0.5kb downstream 0.5kb downstream 3579 true AmTr_v1.0_scaffold00005: 7697741-7701319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 7697741-7698240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 1.0kb upstream 1.0kb upstream 4079 true AmTr_v1.0_scaffold00005: 7698241-7702319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 7701320-7702319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 1.0kb downstream 1.0kb downstream 4079 true AmTr_v1.0_scaffold00005: 7697241-7701319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 7697241-7698240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 2.0kb upstream 2.0kb upstream 5079 true AmTr_v1.0_scaffold00005: 7698241-7703319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 7701320-7703319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 2.0kb downstream 2.0kb downstream 5079 true AmTr_v1.0_scaffold00005: 7696241-7701319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 7696241-7698240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 5.0kb upstream 5.0kb upstream 8079 true AmTr_v1.0_scaffold00005: 7698241-7706319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 7701320-7706319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 5.0kb downstream 5.0kb downstream 8079 true AmTr_v1.0_scaffold00005: 7693241-7701319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 7693241-7698240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 10.0kb upstream 10.0kb upstream 13079 true AmTr_v1.0_scaffold00005: 7698241-7711319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 7701320-7711319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 10.0kb downstream 10.0kb downstream 13079 true AmTr_v1.0_scaffold00005: 7688241-7701319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.194 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 7688241-7698240 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045742 5273 Angiosperm View MSA
121310493 5274 Embryophyte View MSA
123347963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain