Gene : evm_27.TU.AmTr_v1.0_scaffold00004.57 A. trichopoda v1.0
Defline:  (1 of 2) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  57
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.57 Secondary Identifier:  ? PAC:31550308
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5046 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.57 0.5kb upstream 0.5kb upstream 6881 true AmTr_v1.0_scaffold00004: 817071-823951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 817071-817570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 0.5kb downstream 0.5kb downstream 6881 true AmTr_v1.0_scaffold00004: 817571-824451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 823952-824451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 1.0kb upstream 1.0kb upstream 7381 true AmTr_v1.0_scaffold00004: 816571-823951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 816571-817570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 1.0kb downstream 1.0kb downstream 7381 true AmTr_v1.0_scaffold00004: 817571-824951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 823952-824951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 2.0kb upstream 2.0kb upstream 8381 true AmTr_v1.0_scaffold00004: 815571-823951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 815571-817570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 2.0kb downstream 2.0kb downstream 8381 true AmTr_v1.0_scaffold00004: 817571-825951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 823952-825951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 5.0kb upstream 5.0kb upstream 11381 true AmTr_v1.0_scaffold00004: 812571-823951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 812571-817570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 5.0kb downstream 5.0kb downstream 11381 true AmTr_v1.0_scaffold00004: 817571-828951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 823952-828951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 10.0kb upstream 10.0kb upstream 16381 true AmTr_v1.0_scaffold00004: 807571-823951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 807571-817570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 10.0kb downstream 10.0kb downstream 16381 true AmTr_v1.0_scaffold00004: 817571-833951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.57 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 823952-833951 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain