Gene : evm_27.TU.AmTr_v1.0_scaffold00005.157 A. trichopoda v1.0

Defline:  (1 of 1) 3.4.11.2 - Membrane alanyl aminopeptidase / Peptidase E Genomic Order:  154
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.157 Secondary Identifier:  ? PAC:31576053

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6842 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.157 0.5kb upstream 0.5kb upstream 71340 true AmTr_v1.0_scaffold00005: 6416582-6487921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 6487422-6487921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 0.5kb downstream 0.5kb downstream 71340 true AmTr_v1.0_scaffold00005: 6416082-6487421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 6416082-6416581 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 1.0kb upstream 1.0kb upstream 71840 true AmTr_v1.0_scaffold00005: 6416582-6488421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 6487422-6488421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 1.0kb downstream 1.0kb downstream 71840 true AmTr_v1.0_scaffold00005: 6415582-6487421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 6415582-6416581 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 2.0kb upstream 2.0kb upstream 72840 true AmTr_v1.0_scaffold00005: 6416582-6489421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 6487422-6489421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 2.0kb downstream 2.0kb downstream 72840 true AmTr_v1.0_scaffold00005: 6414582-6487421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 6414582-6416581 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 5.0kb upstream 5.0kb upstream 75840 true AmTr_v1.0_scaffold00005: 6416582-6492421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 6487422-6492421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 5.0kb downstream 5.0kb downstream 75840 true AmTr_v1.0_scaffold00005: 6411582-6487421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 6411582-6416581 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 10.0kb upstream 10.0kb upstream 80840 true AmTr_v1.0_scaffold00005: 6416582-6497421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 6487422-6497421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 10.0kb downstream 10.0kb downstream 80840 true AmTr_v1.0_scaffold00005: 6406582-6487421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.157 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 6406582-6416581 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain