Gene : evm_27.TU.AmTr_v1.0_scaffold00005.115 A. trichopoda v1.0
Defline:  (1 of 3) PTHR13068:SF9 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  112
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00005.115 Secondary Identifier:  ? PAC:31576009
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00005.115 0.5kb upstream 0.5kb upstream 2448 true AmTr_v1.0_scaffold00005: 5097656-5100103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00005: 5097656-5098155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 0.5kb downstream 0.5kb downstream 2448 true AmTr_v1.0_scaffold00005: 5098156-5100603 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00005: 5100104-5100603 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 1.0kb upstream 1.0kb upstream 2948 true AmTr_v1.0_scaffold00005: 5097156-5100103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00005: 5097156-5098155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 1.0kb downstream 1.0kb downstream 2948 true AmTr_v1.0_scaffold00005: 5098156-5101103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00005: 5100104-5101103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 2.0kb upstream 2.0kb upstream 3948 true AmTr_v1.0_scaffold00005: 5096156-5100103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00005: 5096156-5098155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 2.0kb downstream 2.0kb downstream 3948 true AmTr_v1.0_scaffold00005: 5098156-5102103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00005: 5100104-5102103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 5.0kb upstream 5.0kb upstream 6948 true AmTr_v1.0_scaffold00005: 5093156-5100103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00005: 5093156-5098155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 5.0kb downstream 5.0kb downstream 6948 true AmTr_v1.0_scaffold00005: 5098156-5105103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00005: 5100104-5105103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 10.0kb upstream 10.0kb upstream 11948 true AmTr_v1.0_scaffold00005: 5088156-5100103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00005: 5088156-5098155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 10.0kb downstream 10.0kb downstream 11948 true AmTr_v1.0_scaffold00005: 5098156-5110103 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00005.115 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00005: 5100104-5110103 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042803 5273 Angiosperm View MSA
121347478 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain