Gene : evm_27.TU.AmTr_v1.0_scaffold00007.89 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10840 - PROGRAMMED CELL DEATH PROTEIN 5 Genomic Order:  88
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.89 Secondary Identifier:  ? PAC:31557949
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.89 0.5kb upstream 0.5kb upstream 8679 true AmTr_v1.0_scaffold00007: 1909107-1917785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 1917286-1917785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 0.5kb downstream 0.5kb downstream 8679 true AmTr_v1.0_scaffold00007: 1908607-1917285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 1908607-1909106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 1.0kb upstream 1.0kb upstream 9179 true AmTr_v1.0_scaffold00007: 1909107-1918285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 1917286-1918285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 1.0kb downstream 1.0kb downstream 9179 true AmTr_v1.0_scaffold00007: 1908107-1917285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 1908107-1909106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 2.0kb upstream 2.0kb upstream 10179 true AmTr_v1.0_scaffold00007: 1909107-1919285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 1917286-1919285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 2.0kb downstream 2.0kb downstream 10179 true AmTr_v1.0_scaffold00007: 1907107-1917285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 1907107-1909106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 5.0kb upstream 5.0kb upstream 13179 true AmTr_v1.0_scaffold00007: 1909107-1922285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 1917286-1922285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 5.0kb downstream 5.0kb downstream 13179 true AmTr_v1.0_scaffold00007: 1904107-1917285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 1904107-1909106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 10.0kb upstream 10.0kb upstream 18179 true AmTr_v1.0_scaffold00007: 1909107-1927285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 1917286-1927285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 10.0kb downstream 10.0kb downstream 18179 true AmTr_v1.0_scaffold00007: 1899107-1917285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.89 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 1899107-1909106 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain