Gene : evm_27.TU.AmTr_v1.0_scaffold00007.92 A. trichopoda v1.0
Defline:  (1 of 1) KOG1889 - Putative phosphoinositide phosphatase Genomic Order:  91
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.92 Secondary Identifier:  ? PAC:31557679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6368 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.92 0.5kb upstream 0.5kb upstream 41769 true AmTr_v1.0_scaffold00007: 1986153-2027921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 2027422-2027921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 0.5kb downstream 0.5kb downstream 41769 true AmTr_v1.0_scaffold00007: 1985653-2027421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 1985653-1986152 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 1.0kb upstream 1.0kb upstream 42269 true AmTr_v1.0_scaffold00007: 1986153-2028421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 2027422-2028421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 1.0kb downstream 1.0kb downstream 42269 true AmTr_v1.0_scaffold00007: 1985153-2027421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 1985153-1986152 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 2.0kb upstream 2.0kb upstream 43269 true AmTr_v1.0_scaffold00007: 1986153-2029421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 2027422-2029421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 2.0kb downstream 2.0kb downstream 43269 true AmTr_v1.0_scaffold00007: 1984153-2027421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 1984153-1986152 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 5.0kb upstream 5.0kb upstream 46269 true AmTr_v1.0_scaffold00007: 1986153-2032421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 2027422-2032421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 5.0kb downstream 5.0kb downstream 46269 true AmTr_v1.0_scaffold00007: 1981153-2027421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 1981153-1986152 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 10.0kb upstream 10.0kb upstream 51269 true AmTr_v1.0_scaffold00007: 1986153-2037421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 2027422-2037421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 10.0kb downstream 10.0kb downstream 51269 true AmTr_v1.0_scaffold00007: 1976153-2027421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.92 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 1976153-1986152 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049709 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain