Gene : evm_27.TU.AmTr_v1.0_scaffold00007.73 A. trichopoda v1.0
Defline:  (1 of 1) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  72
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.73 Secondary Identifier:  ? PAC:31557704
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6013 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.73 0.5kb upstream 0.5kb upstream 3900 true AmTr_v1.0_scaffold00007: 1535141-1539040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 1538541-1539040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 0.5kb downstream 0.5kb downstream 3900 true AmTr_v1.0_scaffold00007: 1534641-1538540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 1534641-1535140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 1.0kb upstream 1.0kb upstream 4400 true AmTr_v1.0_scaffold00007: 1535141-1539540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 1538541-1539540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 1.0kb downstream 1.0kb downstream 4400 true AmTr_v1.0_scaffold00007: 1534141-1538540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 1534141-1535140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 2.0kb upstream 2.0kb upstream 5400 true AmTr_v1.0_scaffold00007: 1535141-1540540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 1538541-1540540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 2.0kb downstream 2.0kb downstream 5400 true AmTr_v1.0_scaffold00007: 1533141-1538540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 1533141-1535140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 5.0kb upstream 5.0kb upstream 8400 true AmTr_v1.0_scaffold00007: 1535141-1543540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 1538541-1543540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 5.0kb downstream 5.0kb downstream 8400 true AmTr_v1.0_scaffold00007: 1530141-1538540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 1530141-1535140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 10.0kb upstream 10.0kb upstream 13400 true AmTr_v1.0_scaffold00007: 1535141-1548540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 1538541-1548540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 10.0kb downstream 10.0kb downstream 13400 true AmTr_v1.0_scaffold00007: 1525141-1538540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.73 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 1525141-1535140 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain