Gene : evm_27.TU.AmTr_v1.0_scaffold00007.48 A. trichopoda v1.0
Defline:  (1 of 1) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  47
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.48 Secondary Identifier:  ? PAC:31557586
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5481 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.48 0.5kb upstream 0.5kb upstream 2023 true AmTr_v1.0_scaffold00007: 947606-949628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 947606-948105 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 0.5kb downstream 0.5kb downstream 2023 true AmTr_v1.0_scaffold00007: 948106-950128 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 949629-950128 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 1.0kb upstream 1.0kb upstream 2523 true AmTr_v1.0_scaffold00007: 947106-949628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 947106-948105 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 1.0kb downstream 1.0kb downstream 2523 true AmTr_v1.0_scaffold00007: 948106-950628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 949629-950628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 2.0kb upstream 2.0kb upstream 3523 true AmTr_v1.0_scaffold00007: 946106-949628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 946106-948105 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 2.0kb downstream 2.0kb downstream 3523 true AmTr_v1.0_scaffold00007: 948106-951628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 949629-951628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 5.0kb upstream 5.0kb upstream 6523 true AmTr_v1.0_scaffold00007: 943106-949628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 943106-948105 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 5.0kb downstream 5.0kb downstream 6523 true AmTr_v1.0_scaffold00007: 948106-954628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 949629-954628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 10.0kb upstream 10.0kb upstream 11523 true AmTr_v1.0_scaffold00007: 938106-949628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 938106-948105 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 10.0kb downstream 10.0kb downstream 11523 true AmTr_v1.0_scaffold00007: 948106-959628 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.48 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 949629-959628 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain