Gene : evm_27.TU.AmTr_v1.0_scaffold00008.121 A. trichopoda v1.0
Defline:  (1 of 1) PF02170//PF02171//PF08699//PF16488 - PAZ domain (PAZ) // Piwi domain (Piwi) // Argonaute linker 1 domain (ArgoL1) // Argonaute linker 2 domain (ArgoL2) Genomic Order:  121
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00008.121 Secondary Identifier:  ? PAC:31569407
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00008.121 0.5kb upstream 0.5kb upstream 108165 true AmTr_v1.0_scaffold00008: 3789691-3897855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00008: 3789691-3790190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 0.5kb downstream 0.5kb downstream 108165 true AmTr_v1.0_scaffold00008: 3790191-3898355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00008: 3897856-3898355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 1.0kb upstream 1.0kb upstream 108665 true AmTr_v1.0_scaffold00008: 3789191-3897855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00008: 3789191-3790190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 1.0kb downstream 1.0kb downstream 108665 true AmTr_v1.0_scaffold00008: 3790191-3898855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00008: 3897856-3898855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 2.0kb upstream 2.0kb upstream 109665 true AmTr_v1.0_scaffold00008: 3788191-3897855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00008: 3788191-3790190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 2.0kb downstream 2.0kb downstream 109665 true AmTr_v1.0_scaffold00008: 3790191-3899855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00008: 3897856-3899855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 5.0kb upstream 5.0kb upstream 112665 true AmTr_v1.0_scaffold00008: 3785191-3897855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00008: 3785191-3790190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 5.0kb downstream 5.0kb downstream 112665 true AmTr_v1.0_scaffold00008: 3790191-3902855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00008: 3897856-3902855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 10.0kb upstream 10.0kb upstream 117665 true AmTr_v1.0_scaffold00008: 3780191-3897855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00008: 3780191-3790190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 10.0kb downstream 10.0kb downstream 117665 true AmTr_v1.0_scaffold00008: 3790191-3907855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.121 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00008: 3897856-3907855 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain