Gene : evm_27.TU.AmTr_v1.0_scaffold00008.113 A. trichopoda v1.0

Defline:  (1 of 4) PTHR10551 - FASCIN Genomic Order:  113
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00008.113 Secondary Identifier:  ? PAC:31569362

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00008.113 0.5kb upstream 0.5kb upstream 25885 true AmTr_v1.0_scaffold00008: 3528212-3554096 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00008: 3553597-3554096 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 0.5kb downstream 0.5kb downstream 25885 true AmTr_v1.0_scaffold00008: 3527712-3553596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00008: 3527712-3528211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 1.0kb upstream 1.0kb upstream 26385 true AmTr_v1.0_scaffold00008: 3528212-3554596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00008: 3553597-3554596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 1.0kb downstream 1.0kb downstream 26385 true AmTr_v1.0_scaffold00008: 3527212-3553596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00008: 3527212-3528211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 2.0kb upstream 2.0kb upstream 27385 true AmTr_v1.0_scaffold00008: 3528212-3555596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00008: 3553597-3555596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 2.0kb downstream 2.0kb downstream 27385 true AmTr_v1.0_scaffold00008: 3526212-3553596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00008: 3526212-3528211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 5.0kb upstream 5.0kb upstream 30385 true AmTr_v1.0_scaffold00008: 3528212-3558596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00008: 3553597-3558596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 5.0kb downstream 5.0kb downstream 30385 true AmTr_v1.0_scaffold00008: 3523212-3553596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00008: 3523212-3528211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 10.0kb upstream 10.0kb upstream 35385 true AmTr_v1.0_scaffold00008: 3528212-3563596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00008: 3553597-3563596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 10.0kb downstream 10.0kb downstream 35385 true AmTr_v1.0_scaffold00008: 3518212-3553596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.113 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00008: 3518212-3528211 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain