Gene : evm_27.TU.AmTr_v1.0_scaffold00007.244 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11361:SF35 - DNA MISMATCH REPAIR PROTEIN MSH2 Genomic Order:  241
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.244 Secondary Identifier:  ? PAC:31557678
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.244 0.5kb upstream 0.5kb upstream 24193 true AmTr_v1.0_scaffold00007: 5300950-5325142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 5324643-5325142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 0.5kb downstream 0.5kb downstream 24193 true AmTr_v1.0_scaffold00007: 5300450-5324642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 5300450-5300949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 1.0kb upstream 1.0kb upstream 24693 true AmTr_v1.0_scaffold00007: 5300950-5325642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 5324643-5325642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 1.0kb downstream 1.0kb downstream 24693 true AmTr_v1.0_scaffold00007: 5299950-5324642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 5299950-5300949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 2.0kb upstream 2.0kb upstream 25693 true AmTr_v1.0_scaffold00007: 5300950-5326642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 5324643-5326642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 2.0kb downstream 2.0kb downstream 25693 true AmTr_v1.0_scaffold00007: 5298950-5324642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 5298950-5300949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 5.0kb upstream 5.0kb upstream 28693 true AmTr_v1.0_scaffold00007: 5300950-5329642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 5324643-5329642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 5.0kb downstream 5.0kb downstream 28693 true AmTr_v1.0_scaffold00007: 5295950-5324642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 5295950-5300949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 10.0kb upstream 10.0kb upstream 33693 true AmTr_v1.0_scaffold00007: 5300950-5334642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 5324643-5334642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 10.0kb downstream 10.0kb downstream 33693 true AmTr_v1.0_scaffold00007: 5290950-5324642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.244 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 5290950-5300949 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain