Gene : evm_27.TU.AmTr_v1.0_scaffold00006.42 A. trichopoda v1.0
Defline:  (1 of 1) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00006.42 Secondary Identifier:  ? PAC:31560433
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00006.42 0.5kb upstream 0.5kb upstream 13699 true AmTr_v1.0_scaffold00006: 1445001-1458699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00006: 1458200-1458699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 0.5kb downstream 0.5kb downstream 13699 true AmTr_v1.0_scaffold00006: 1444501-1458199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00006: 1444501-1445000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 1.0kb upstream 1.0kb upstream 14199 true AmTr_v1.0_scaffold00006: 1445001-1459199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00006: 1458200-1459199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 1.0kb downstream 1.0kb downstream 14199 true AmTr_v1.0_scaffold00006: 1444001-1458199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00006: 1444001-1445000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 2.0kb upstream 2.0kb upstream 15199 true AmTr_v1.0_scaffold00006: 1445001-1460199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00006: 1458200-1460199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 2.0kb downstream 2.0kb downstream 15199 true AmTr_v1.0_scaffold00006: 1443001-1458199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00006: 1443001-1445000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 5.0kb upstream 5.0kb upstream 18199 true AmTr_v1.0_scaffold00006: 1445001-1463199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00006: 1458200-1463199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 5.0kb downstream 5.0kb downstream 18199 true AmTr_v1.0_scaffold00006: 1440001-1458199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00006: 1440001-1445000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 10.0kb upstream 10.0kb upstream 23199 true AmTr_v1.0_scaffold00006: 1445001-1468199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00006: 1458200-1468199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 10.0kb downstream 10.0kb downstream 23199 true AmTr_v1.0_scaffold00006: 1435001-1458199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00006.42 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00006: 1435001-1445000 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain