Gene : evm_27.TU.AmTr_v1.0_scaffold00007.164 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34195:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC Genomic Order:  162
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.164 Secondary Identifier:  ? PAC:31557666
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.164 0.5kb upstream 0.5kb upstream 2484 true AmTr_v1.0_scaffold00007: 3461580-3464063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 3461580-3462079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 0.5kb downstream 0.5kb downstream 2484 true AmTr_v1.0_scaffold00007: 3462080-3464563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 3464064-3464563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 1.0kb upstream 1.0kb upstream 2984 true AmTr_v1.0_scaffold00007: 3461080-3464063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 3461080-3462079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 1.0kb downstream 1.0kb downstream 2984 true AmTr_v1.0_scaffold00007: 3462080-3465063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 3464064-3465063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 2.0kb upstream 2.0kb upstream 3984 true AmTr_v1.0_scaffold00007: 3460080-3464063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 3460080-3462079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 2.0kb downstream 2.0kb downstream 3984 true AmTr_v1.0_scaffold00007: 3462080-3466063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 3464064-3466063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 5.0kb upstream 5.0kb upstream 6984 true AmTr_v1.0_scaffold00007: 3457080-3464063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 3457080-3462079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 5.0kb downstream 5.0kb downstream 6984 true AmTr_v1.0_scaffold00007: 3462080-3469063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 3464064-3469063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 10.0kb upstream 10.0kb upstream 11984 true AmTr_v1.0_scaffold00007: 3452080-3464063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 3452080-3462079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 10.0kb downstream 10.0kb downstream 11984 true AmTr_v1.0_scaffold00007: 3462080-3474063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.164 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 3464064-3474063 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044551 5273 Angiosperm View MSA
121347312 5274 Embryophyte View MSA
123425033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain