Gene : evm_27.TU.AmTr_v1.0_scaffold00009.387 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13152 - TFIIH, POLYPEPTIDE 4 Genomic Order:  384
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.387 Secondary Identifier:  ? PAC:31568644
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.387 0.5kb upstream 0.5kb upstream 8567 true AmTr_v1.0_scaffold00009: 8583589-8592155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 8591656-8592155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 0.5kb downstream 0.5kb downstream 8567 true AmTr_v1.0_scaffold00009: 8583089-8591655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 8583089-8583588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 1.0kb upstream 1.0kb upstream 9067 true AmTr_v1.0_scaffold00009: 8583589-8592655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 8591656-8592655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 1.0kb downstream 1.0kb downstream 9067 true AmTr_v1.0_scaffold00009: 8582589-8591655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 8582589-8583588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 2.0kb upstream 2.0kb upstream 10067 true AmTr_v1.0_scaffold00009: 8583589-8593655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 8591656-8593655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 2.0kb downstream 2.0kb downstream 10067 true AmTr_v1.0_scaffold00009: 8581589-8591655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 8581589-8583588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 5.0kb upstream 5.0kb upstream 13067 true AmTr_v1.0_scaffold00009: 8583589-8596655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 8591656-8596655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 5.0kb downstream 5.0kb downstream 13067 true AmTr_v1.0_scaffold00009: 8578589-8591655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 8578589-8583588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 10.0kb upstream 10.0kb upstream 18067 true AmTr_v1.0_scaffold00009: 8583589-8601655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 8591656-8601655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 10.0kb downstream 10.0kb downstream 18067 true AmTr_v1.0_scaffold00009: 8573589-8591655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.387 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 8573589-8583588 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain