Gene : evm_27.TU.AmTr_v1.0_scaffold00009.423 A. trichopoda v1.0
Defline:  (1 of 2) PTHR21649//PTHR21649:SF28 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  420
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.423 Secondary Identifier:  ? PAC:31568876
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.423 0.5kb upstream 0.5kb upstream 1590 true AmTr_v1.0_scaffold00009: 9134774-9136363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 9134774-9135273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 0.5kb downstream 0.5kb downstream 1590 true AmTr_v1.0_scaffold00009: 9135274-9136863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 9136364-9136863 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 1.0kb upstream 1.0kb upstream 2090 true AmTr_v1.0_scaffold00009: 9134274-9136363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 9134274-9135273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 1.0kb downstream 1.0kb downstream 2090 true AmTr_v1.0_scaffold00009: 9135274-9137363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 9136364-9137363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 2.0kb upstream 2.0kb upstream 3090 true AmTr_v1.0_scaffold00009: 9133274-9136363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 9133274-9135273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 2.0kb downstream 2.0kb downstream 3090 true AmTr_v1.0_scaffold00009: 9135274-9138363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 9136364-9138363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 5.0kb upstream 5.0kb upstream 6090 true AmTr_v1.0_scaffold00009: 9130274-9136363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 9130274-9135273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 5.0kb downstream 5.0kb downstream 6090 true AmTr_v1.0_scaffold00009: 9135274-9141363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 9136364-9141363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 10.0kb upstream 10.0kb upstream 11090 true AmTr_v1.0_scaffold00009: 9125274-9136363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 9125274-9135273 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 10.0kb downstream 10.0kb downstream 11090 true AmTr_v1.0_scaffold00009: 9135274-9146363 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.423 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 9136364-9146363 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain