Gene : evm_27.TU.AmTr_v1.0_scaffold00009.277 A. trichopoda v1.0
Defline:  (1 of 4) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  274
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.277 Secondary Identifier:  ? PAC:31568909
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-4081 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.277 0.5kb upstream 0.5kb upstream 5668 true AmTr_v1.0_scaffold00009: 6896191-6901858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 6901359-6901858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 0.5kb downstream 0.5kb downstream 5668 true AmTr_v1.0_scaffold00009: 6895691-6901358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 6895691-6896190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 1.0kb upstream 1.0kb upstream 6168 true AmTr_v1.0_scaffold00009: 6896191-6902358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 6901359-6902358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 1.0kb downstream 1.0kb downstream 6168 true AmTr_v1.0_scaffold00009: 6895191-6901358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 6895191-6896190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 2.0kb upstream 2.0kb upstream 7168 true AmTr_v1.0_scaffold00009: 6896191-6903358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 6901359-6903358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 2.0kb downstream 2.0kb downstream 7168 true AmTr_v1.0_scaffold00009: 6894191-6901358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 6894191-6896190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 5.0kb upstream 5.0kb upstream 10168 true AmTr_v1.0_scaffold00009: 6896191-6906358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 6901359-6906358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 5.0kb downstream 5.0kb downstream 10168 true AmTr_v1.0_scaffold00009: 6891191-6901358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 6891191-6896190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 10.0kb upstream 10.0kb upstream 15168 true AmTr_v1.0_scaffold00009: 6896191-6911358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 6901359-6911358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 10.0kb downstream 10.0kb downstream 15168 true AmTr_v1.0_scaffold00009: 6886191-6901358 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.277 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 6886191-6896190 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain